﻿2026-01-05T01:33:08.3018429Z Current runner version: '2.330.0'
2026-01-05T01:33:08.3049885Z ##[group]Runner Image Provisioner
2026-01-05T01:33:08.3050955Z Hosted Compute Agent
2026-01-05T01:33:08.3051740Z Version: 20251202.455
2026-01-05T01:33:08.3052596Z Commit: 6c10caca4910e198df60de23adf20ad317c474e3
2026-01-05T01:33:08.3053604Z Build Date: 2025-12-02T15:56:59Z
2026-01-05T01:33:08.3054653Z Worker ID: {a95e9061-9b7f-428b-afba-6001930a5790}
2026-01-05T01:33:08.3055663Z ##[endgroup]
2026-01-05T01:33:08.3056364Z ##[group]Operating System
2026-01-05T01:33:08.3057196Z Microsoft Windows Server 2019
2026-01-05T01:33:08.3058103Z 10.0.17763
2026-01-05T01:33:08.3058844Z Datacenter
2026-01-05T01:33:08.3059477Z ##[endgroup]
2026-01-05T01:33:08.3060236Z ##[group]Runner Image
2026-01-05T01:33:08.3060997Z Image: windows-2019
2026-01-05T01:33:08.3061818Z Version: 20250623.2.0
2026-01-05T01:33:08.3064252Z Included Software: https://github.com/actions/runner-images/blob/win19/20250623.2/images/windows/Windows2019-Readme.md
2026-01-05T01:33:08.3066819Z Image Release: https://github.com/actions/runner-images/releases/tag/win19%2F20250623.2
2026-01-05T01:33:08.3068488Z ##[endgroup]
2026-01-05T01:33:08.3073433Z ##[group]GITHUB_TOKEN Permissions
2026-01-05T01:33:08.3077502Z Actions: write
2026-01-05T01:33:08.3078394Z ArtifactMetadata: write
2026-01-05T01:33:08.3079292Z Attestations: write
2026-01-05T01:33:08.3080134Z Checks: write
2026-01-05T01:33:08.3080783Z Contents: write
2026-01-05T01:33:08.3081582Z Deployments: write
2026-01-05T01:33:08.3082495Z Discussions: write
2026-01-05T01:33:08.3083501Z Issues: write
2026-01-05T01:33:08.3084333Z Metadata: read
2026-01-05T01:33:08.3085096Z Models: read
2026-01-05T01:33:08.3085878Z Packages: write
2026-01-05T01:33:08.3086543Z Pages: write
2026-01-05T01:33:08.3087272Z PullRequests: write
2026-01-05T01:33:08.3088159Z RepositoryProjects: write
2026-01-05T01:33:08.3089016Z SecurityEvents: write
2026-01-05T01:33:08.3089723Z Statuses: write
2026-01-05T01:33:08.3090478Z ##[endgroup]
2026-01-05T01:33:08.3093215Z Secret source: Actions
2026-01-05T01:33:08.3094167Z Prepare workflow directory
2026-01-05T01:33:08.3548542Z Prepare all required actions
2026-01-05T01:33:08.3602501Z Getting action download info
2026-01-05T01:33:08.7116322Z Download action repository 'actions/checkout@v4' (SHA:34e114876b0b11c390a56381ad16ebd13914f8d5)
2026-01-05T01:33:09.2209009Z Download action repository 'actions/setup-python@v5' (SHA:a26af69be951a213d495a4c3e4e4022e16d87065)
2026-01-05T01:33:09.8388221Z Download action repository 'actions/download-artifact@v4' (SHA:d3f86a106a0bac45b974a628896c90dbdf5c8093)
2026-01-05T01:33:10.6027554Z Complete job name: Test wheels on windows-2019 with Python 3.10
2026-01-05T01:33:10.7446310Z ##[group]Run actions/checkout@v4
2026-01-05T01:33:10.7447650Z with:
2026-01-05T01:33:10.7448356Z   repository: worm-portal/aqequil
2026-01-05T01:33:10.7449516Z   token: ***
2026-01-05T01:33:10.7450177Z   ssh-strict: true
2026-01-05T01:33:10.7450874Z   ssh-user: git
2026-01-05T01:33:10.7451609Z   persist-credentials: true
2026-01-05T01:33:10.7452413Z   clean: true
2026-01-05T01:33:10.7453118Z   sparse-checkout-cone-mode: true
2026-01-05T01:33:10.7453970Z   fetch-depth: 1
2026-01-05T01:33:10.7454647Z   fetch-tags: false
2026-01-05T01:33:10.7455363Z   show-progress: true
2026-01-05T01:33:10.7456073Z   lfs: false
2026-01-05T01:33:10.7456721Z   submodules: false
2026-01-05T01:33:10.7457446Z   set-safe-directory: true
2026-01-05T01:33:10.7458440Z ##[endgroup]
2026-01-05T01:33:10.9038677Z Syncing repository: worm-portal/aqequil
2026-01-05T01:33:10.9041736Z ##[group]Getting Git version info
2026-01-05T01:33:10.9042762Z Working directory is 'D:\a\aqequil\aqequil'
2026-01-05T01:33:11.0035170Z [command]"C:\Program Files\Git\bin\git.exe" version
2026-01-05T01:33:11.3267809Z git version 2.50.0.windows.1
2026-01-05T01:33:11.3323728Z ##[endgroup]
2026-01-05T01:33:11.3345201Z Temporarily overriding HOME='D:\a\_temp\fe1ed72d-98af-4c5f-91bc-ea772d96eaac' before making global git config changes
2026-01-05T01:33:11.3351982Z Adding repository directory to the temporary git global config as a safe directory
2026-01-05T01:33:11.3360951Z [command]"C:\Program Files\Git\bin\git.exe" config --global --add safe.directory D:\a\aqequil\aqequil
2026-01-05T01:33:11.4120500Z Deleting the contents of 'D:\a\aqequil\aqequil'
2026-01-05T01:33:11.4126854Z ##[group]Initializing the repository
2026-01-05T01:33:11.4140099Z [command]"C:\Program Files\Git\bin\git.exe" init D:\a\aqequil\aqequil
2026-01-05T01:33:11.5070304Z Initialized empty Git repository in D:/a/aqequil/aqequil/.git/
2026-01-05T01:33:11.5121731Z [command]"C:\Program Files\Git\bin\git.exe" remote add origin https://github.com/worm-portal/aqequil
2026-01-05T01:33:11.5613335Z ##[endgroup]
2026-01-05T01:33:11.5614656Z ##[group]Disabling automatic garbage collection
2026-01-05T01:33:11.5626220Z [command]"C:\Program Files\Git\bin\git.exe" config --local gc.auto 0
2026-01-05T01:33:11.5862464Z ##[endgroup]
2026-01-05T01:33:11.5863632Z ##[group]Setting up auth
2026-01-05T01:33:11.5879067Z [command]"C:\Program Files\Git\bin\git.exe" config --local --name-only --get-regexp core\.sshCommand
2026-01-05T01:33:11.6126979Z [command]"C:\Program Files\Git\bin\git.exe" submodule foreach --recursive "sh -c \"git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || :\""
2026-01-05T01:33:12.8625497Z [command]"C:\Program Files\Git\bin\git.exe" config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader
2026-01-05T01:33:12.8868549Z [command]"C:\Program Files\Git\bin\git.exe" submodule foreach --recursive "sh -c \"git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || :\""
2026-01-05T01:33:13.3199577Z [command]"C:\Program Files\Git\bin\git.exe" config --local --name-only --get-regexp ^includeIf\.gitdir:
2026-01-05T01:33:13.3454465Z [command]"C:\Program Files\Git\bin\git.exe" submodule foreach --recursive "git config --local --show-origin --name-only --get-regexp remote.origin.url"
2026-01-05T01:33:13.7727766Z [command]"C:\Program Files\Git\bin\git.exe" config --local http.https://github.com/.extraheader "AUTHORIZATION: basic ***"
2026-01-05T01:33:13.7975866Z ##[endgroup]
2026-01-05T01:33:13.7976896Z ##[group]Fetching the repository
2026-01-05T01:33:13.7992705Z [command]"C:\Program Files\Git\bin\git.exe" -c protocol.version=2 fetch --no-tags --prune --no-recurse-submodules --depth=1 origin +0fba8641708a9a29f5cf75d5e1aa5af56402a902:refs/tags/v1.0.1
2026-01-05T01:33:15.0324598Z From https://github.com/worm-portal/aqequil
2026-01-05T01:33:15.0328244Z  * [new ref]         0fba8641708a9a29f5cf75d5e1aa5af56402a902 -> v1.0.1
2026-01-05T01:33:15.0622546Z ##[endgroup]
2026-01-05T01:33:15.0623313Z ##[group]Determining the checkout info
2026-01-05T01:33:15.0626262Z ##[endgroup]
2026-01-05T01:33:15.0647181Z [command]"C:\Program Files\Git\bin\git.exe" sparse-checkout disable
2026-01-05T01:33:15.1023401Z [command]"C:\Program Files\Git\bin\git.exe" config --local --unset-all extensions.worktreeConfig
2026-01-05T01:33:15.1283553Z ##[group]Checking out the ref
2026-01-05T01:33:15.1297693Z [command]"C:\Program Files\Git\bin\git.exe" checkout --progress --force refs/tags/v1.0.1
2026-01-05T01:33:15.4041415Z Note: switching to 'refs/tags/v1.0.1'.
2026-01-05T01:33:15.4041886Z 
2026-01-05T01:33:15.4042243Z You are in 'detached HEAD' state. You can look around, make experimental
2026-01-05T01:33:15.4043075Z changes and commit them, and you can discard any commits you make in this
2026-01-05T01:33:15.4044022Z state without impacting any branches by switching back to a branch.
2026-01-05T01:33:15.4044568Z 
2026-01-05T01:33:15.4045236Z If you want to create a new branch to retain commits you create, you may
2026-01-05T01:33:15.4045837Z do so (now or later) by using -c with the switch command. Example:
2026-01-05T01:33:15.4046131Z 
2026-01-05T01:33:15.4046265Z   git switch -c <new-branch-name>
2026-01-05T01:33:15.4047373Z 
2026-01-05T01:33:15.4047493Z Or undo this operation with:
2026-01-05T01:33:15.4047766Z 
2026-01-05T01:33:15.4047855Z   git switch -
2026-01-05T01:33:15.4047981Z 
2026-01-05T01:33:15.4048215Z Turn off this advice by setting config variable advice.detachedHead to false
2026-01-05T01:33:15.4048566Z 
2026-01-05T01:33:15.4048801Z HEAD is now at 0fba864 Add automatic versioning from git tags using setuptools_scm
2026-01-05T01:33:15.4079073Z ##[endgroup]
2026-01-05T01:33:15.4461561Z [command]"C:\Program Files\Git\bin\git.exe" log -1 --format=%H
2026-01-05T01:33:15.4673820Z 0fba8641708a9a29f5cf75d5e1aa5af56402a902
2026-01-05T01:33:15.5031840Z ##[group]Run actions/setup-python@v5
2026-01-05T01:33:15.5032165Z with:
2026-01-05T01:33:15.5032338Z   python-version: 3.10
2026-01-05T01:33:15.5032540Z   check-latest: false
2026-01-05T01:33:15.5032849Z   token: ***
2026-01-05T01:33:15.5033021Z   update-environment: true
2026-01-05T01:33:15.5033242Z   allow-prereleases: false
2026-01-05T01:33:15.5033458Z   freethreaded: false
2026-01-05T01:33:15.5033632Z ##[endgroup]
2026-01-05T01:33:15.7145212Z ##[group]Installed versions
2026-01-05T01:33:15.7417869Z Successfully set up CPython (3.10.11)
2026-01-05T01:33:15.7418467Z ##[endgroup]
2026-01-05T01:33:15.7680379Z ##[group]Run actions/download-artifact@v4
2026-01-05T01:33:15.7680728Z with:
2026-01-05T01:33:15.7680906Z   name: wheels-windows-2019
2026-01-05T01:33:15.7681116Z   path: wheelhouse
2026-01-05T01:33:15.7681299Z   merge-multiple: false
2026-01-05T01:33:15.7681504Z   repository: worm-portal/aqequil
2026-01-05T01:33:15.7681730Z   run-id: 20702070857
2026-01-05T01:33:15.7681897Z env:
2026-01-05T01:33:15.7682129Z   pythonLocation: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:33:15.7682581Z   PKG_CONFIG_PATH: C:\hostedtoolcache\windows\Python\3.10.11\x64/lib/pkgconfig
2026-01-05T01:33:15.7683013Z   Python_ROOT_DIR: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:33:15.7683392Z   Python2_ROOT_DIR: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:33:15.7683775Z   Python3_ROOT_DIR: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:33:15.7684065Z ##[endgroup]
2026-01-05T01:33:16.0474806Z Downloading single artifact
2026-01-05T01:33:16.2357173Z Preparing to download the following artifacts:
2026-01-05T01:33:16.2358072Z - wheels-windows-2019 (ID: 5019935684, Size: 23024769, Expected Digest: sha256:b79d51ee2f30d1247dff1e95897f46290a31dfe3822f377c914f152c5233a68a)
2026-01-05T01:33:16.3491981Z Redirecting to blob download url: https://productionresultssa18.blob.core.windows.net/actions-results/26a74c06-72e1-4403-8f14-91bf0d49fcbc/workflow-job-run-dc62d33d-f61e-5c66-b8b0-b0fb4e2697e9/artifacts/2d74564dac50ace46aa55f3b0736466cb259cb536408fda096bfbd335df3bf65.zip
2026-01-05T01:33:16.3494267Z Starting download of artifact to: D:\a\aqequil\aqequil\wheelhouse
2026-01-05T01:33:16.5350803Z (node:6780) [DEP0005] DeprecationWarning: Buffer() is deprecated due to security and usability issues. Please use the Buffer.alloc(), Buffer.allocUnsafe(), or Buffer.from() methods instead.
2026-01-05T01:33:16.5352620Z (Use `node --trace-deprecation ...` to show where the warning was created)
2026-01-05T01:33:17.1245026Z SHA256 digest of downloaded artifact is b79d51ee2f30d1247dff1e95897f46290a31dfe3822f377c914f152c5233a68a
2026-01-05T01:33:17.1246280Z Artifact download completed successfully.
2026-01-05T01:33:17.1246821Z Total of 1 artifact(s) downloaded
2026-01-05T01:33:17.1256394Z Download artifact has finished successfully
2026-01-05T01:33:17.1500266Z ##[group]Run PYVER=$(echo "3.10" | tr -d '.')
2026-01-05T01:33:17.1500663Z [36;1mPYVER=$(echo "3.10" | tr -d '.')[0m
2026-01-05T01:33:17.1501051Z [36;1mpython -m pip install wheelhouse/aqequil-*-cp${PYVER}-*.whl[0m
2026-01-05T01:33:17.1562896Z shell: C:\Program Files\Git\bin\bash.EXE --noprofile --norc -e -o pipefail {0}
2026-01-05T01:33:17.1563279Z env:
2026-01-05T01:33:17.1563536Z   pythonLocation: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:33:17.1564177Z   PKG_CONFIG_PATH: C:\hostedtoolcache\windows\Python\3.10.11\x64/lib/pkgconfig
2026-01-05T01:33:17.1564611Z   Python_ROOT_DIR: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:33:17.1564995Z   Python2_ROOT_DIR: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:33:17.1565371Z   Python3_ROOT_DIR: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:33:17.1565656Z ##[endgroup]
2026-01-05T01:33:20.8058081Z Processing d:\a\aqequil\aqequil\wheelhouse\aqequil-1.0.2.dev0+g0fba86417.d20260105-cp310-cp310-win_amd64.whl
2026-01-05T01:33:21.1357689Z Collecting pandas (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:21.1923147Z   Downloading pandas-2.3.3-cp310-cp310-win_amd64.whl.metadata (19 kB)
2026-01-05T01:33:21.4752537Z Collecting numpy (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:21.4919428Z   Downloading numpy-2.2.6-cp310-cp310-win_amd64.whl.metadata (60 kB)
2026-01-05T01:33:21.7143760Z Collecting matplotlib (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:21.7368998Z   Downloading matplotlib-3.10.8-cp310-cp310-win_amd64.whl.metadata (52 kB)
2026-01-05T01:33:21.8170453Z Collecting plotly (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:21.8321729Z   Downloading plotly-6.5.0-py3-none-any.whl.metadata (8.5 kB)
2026-01-05T01:33:21.9203641Z Collecting ipython (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:21.9390227Z   Downloading ipython-8.37.0-py3-none-any.whl.metadata (5.1 kB)
2026-01-05T01:33:22.0023947Z Collecting chemparse (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:22.0192584Z   Downloading chemparse-0.3.2-py3-none-any.whl.metadata (1.7 kB)
2026-01-05T01:33:22.0886248Z Collecting dill (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:22.1038098Z   Downloading dill-0.4.0-py3-none-any.whl.metadata (10 kB)
2026-01-05T01:33:22.1510578Z Collecting periodictable (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:22.1672066Z   Downloading periodictable-2.0.2-py3-none-any.whl.metadata (5.4 kB)
2026-01-05T01:33:22.2276648Z Collecting natsort (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:22.2445141Z   Downloading natsort-8.4.0-py3-none-any.whl.metadata (21 kB)
2026-01-05T01:33:22.2927748Z Collecting roman (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:22.3083248Z   Downloading roman-5.2-py3-none-any.whl.metadata (4.3 kB)
2026-01-05T01:33:22.3751602Z Collecting ipywidgets (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:22.3912959Z   Downloading ipywidgets-8.1.8-py3-none-any.whl.metadata (2.4 kB)
2026-01-05T01:33:22.4416623Z Collecting wormutils (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:22.4576414Z   Downloading wormutils-0.2.0-py3-none-any.whl.metadata (723 bytes)
2026-01-05T01:33:22.5284077Z Collecting pychnosz (from aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:22.9755083Z   Downloading pychnosz-1.1.12-cp310-cp310-win_amd64.whl.metadata (8.4 kB)
2026-01-05T01:33:23.0282944Z Collecting colorama (from ipython->aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:23.0447590Z   Downloading colorama-0.4.6-py2.py3-none-any.whl.metadata (17 kB)
2026-01-05T01:33:23.0944292Z Collecting decorator (from ipython->aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:23.1093370Z   Downloading decorator-5.2.1-py3-none-any.whl.metadata (3.9 kB)
2026-01-05T01:33:23.1637967Z Collecting exceptiongroup (from ipython->aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:23.1787746Z   Downloading exceptiongroup-1.3.1-py3-none-any.whl.metadata (6.7 kB)
2026-01-05T01:33:23.2313451Z Collecting jedi>=0.16 (from ipython->aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:23.2459286Z   Downloading jedi-0.19.2-py2.py3-none-any.whl.metadata (22 kB)
2026-01-05T01:33:23.3026245Z Collecting matplotlib-inline (from ipython->aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:23.3178388Z   Downloading matplotlib_inline-0.2.1-py3-none-any.whl.metadata (2.3 kB)
2026-01-05T01:33:23.3876583Z Collecting prompt_toolkit<3.1.0,>=3.0.41 (from ipython->aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:23.4038169Z   Downloading prompt_toolkit-3.0.52-py3-none-any.whl.metadata (6.4 kB)
2026-01-05T01:33:23.4607828Z Collecting pygments>=2.4.0 (from ipython->aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:23.4752829Z   Downloading pygments-2.19.2-py3-none-any.whl.metadata (2.5 kB)
2026-01-05T01:33:23.5297454Z Collecting stack_data (from ipython->aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:23.5445402Z   Downloading stack_data-0.6.3-py3-none-any.whl.metadata (18 kB)
2026-01-05T01:33:23.5952649Z Collecting traitlets>=5.13.0 (from ipython->aqequil==1.0.2.dev0+g0fba86417.d20260105)
2026-01-05T01:33:23.6107302Z   Downloading traitlets-5.14.3-py3-none-any.whl.metadata (10 kB)
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2026-01-05T01:33:30.2633822Z Installing collected packages: pytz, pure-eval, widgetsnbextension, wcwidth, urllib3, tzdata, typing_extensions, traitlets, six, roman, pyparsing, pygments, pillow, parso, packaging, numpy, natsort, narwhals, kiwisolver, jupyterlab_widgets, importlib_resources, idna, fonttools, executing, dill, decorator, cycler, comm, colorama, chemparse, charset_normalizer, certifi, asttokens, stack_data, scipy, requests, python-dateutil, prompt_toolkit, plotly, periodictable, matplotlib-inline, jedi, exceptiongroup, contourpy, pandas, matplotlib, ipython, wormutils, pychnosz, ipywidgets, aqequil
2026-01-05T01:34:14.1049111Z 
2026-01-05T01:34:14.1216833Z Successfully installed aqequil-1.0.2.dev0+g0fba86417.d20260105 asttokens-3.0.1 certifi-2026.1.4 charset_normalizer-3.4.4 chemparse-0.3.2 colorama-0.4.6 comm-0.2.3 contourpy-1.3.2 cycler-0.12.1 decorator-5.2.1 dill-0.4.0 exceptiongroup-1.3.1 executing-2.2.1 fonttools-4.61.1 idna-3.11 importlib_resources-6.5.2 ipython-8.37.0 ipywidgets-8.1.8 jedi-0.19.2 jupyterlab_widgets-3.0.16 kiwisolver-1.4.9 matplotlib-3.10.8 matplotlib-inline-0.2.1 narwhals-2.14.0 natsort-8.4.0 numpy-2.2.6 packaging-25.0 pandas-2.3.3 parso-0.8.5 periodictable-2.0.2 pillow-12.1.0 plotly-6.5.0 prompt_toolkit-3.0.52 pure-eval-0.2.3 pychnosz-1.1.12 pygments-2.19.2 pyparsing-3.3.1 python-dateutil-2.9.0.post0 pytz-2025.2 requests-2.32.5 roman-5.2 scipy-1.15.3 six-1.17.0 stack_data-0.6.3 traitlets-5.14.3 typing_extensions-4.15.0 tzdata-2025.3 urllib3-2.6.2 wcwidth-0.2.14 widgetsnbextension-4.0.15 wormutils-0.2.0
2026-01-05T01:34:14.3624752Z 
2026-01-05T01:34:14.3626339Z [notice] A new release of pip is available: 25.1.1 -> 25.3
2026-01-05T01:34:14.3626999Z [notice] To update, run: python.exe -m pip install --upgrade pip
2026-01-05T01:34:14.7463614Z ##[group]Run cp "$GITHUB_WORKSPACE/test_integration.py" "$RUNNER_TEMP/"
2026-01-05T01:34:14.7464165Z [36;1mcp "$GITHUB_WORKSPACE/test_integration.py" "$RUNNER_TEMP/"[0m
2026-01-05T01:34:14.7464510Z [36;1mcd "$RUNNER_TEMP"[0m
2026-01-05T01:34:14.7464741Z [36;1mpython test_integration.py[0m
2026-01-05T01:34:14.7476753Z shell: C:\Program Files\Git\bin\bash.EXE --noprofile --norc -e -o pipefail {0}
2026-01-05T01:34:14.7477133Z env:
2026-01-05T01:34:14.7477386Z   pythonLocation: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:34:14.7477818Z   PKG_CONFIG_PATH: C:\hostedtoolcache\windows\Python\3.10.11\x64/lib/pkgconfig
2026-01-05T01:34:14.7478252Z   Python_ROOT_DIR: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:34:14.7478631Z   Python2_ROOT_DIR: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:34:14.7479013Z   Python3_ROOT_DIR: C:\hostedtoolcache\windows\Python\3.10.11\x64
2026-01-05T01:34:14.7479305Z ##[endgroup]
2026-01-05T01:34:49.6538595Z 
2026-01-05T01:34:49.6539137Z ============================================================
2026-01-05T01:34:49.6539644Z AQEQUIL INTEGRATION TEST SUITE
2026-01-05T01:34:49.6540013Z ============================================================
2026-01-05T01:34:49.6540403Z Python: 3.10.11
2026-01-05T01:34:49.6540647Z Platform: win32
2026-01-05T01:34:49.6540933Z Architecture: AMD64
2026-01-05T01:34:49.6541239Z ============================================================
2026-01-05T01:34:49.6541634Z ============================================================
2026-01-05T01:34:49.6542068Z Test 1: Checking for bundled EQ3/6 executables
2026-01-05T01:34:49.6542754Z ============================================================
2026-01-05T01:34:49.6543516Z [OK] Found bundled executables at: C:\hostedtoolcache\windows\Python\3.10.11\x64\lib\site-packages\aqequil\bin
2026-01-05T01:34:49.6544258Z   [OK] eq3nr.exe (1.47 MB)
2026-01-05T01:34:49.6544563Z   [OK] eq6.exe (2.24 MB)
2026-01-05T01:34:49.6544866Z   [OK] eqpt.exe (1.01 MB)
2026-01-05T01:34:49.6545068Z 
2026-01-05T01:34:49.6545189Z ============================================================
2026-01-05T01:34:49.6545609Z Test 2: Testing aqequil import and basic usage
2026-01-05T01:34:49.6546023Z ============================================================
2026-01-05T01:34:49.6546418Z [OK] Successfully imported aqequil
2026-01-05T01:34:49.6547238Z [OK] Found test data at: C:\hostedtoolcache\windows\Python\3.10.11\x64\lib\site-packages\aqequil\test_data\input_example_wrm.csv
2026-01-05T01:34:49.6547954Z 
2026-01-05T01:34:49.6548080Z ============================================================
2026-01-05T01:34:49.6548558Z Test 3: Downloading latest data0.wrm from WORM-db
2026-01-05T01:34:49.6548963Z ============================================================
2026-01-05T01:34:49.6549715Z Downloading data0.wrm from https://raw.githubusercontent.com/worm-portal/WORM-db/master/data0.wrm...
2026-01-05T01:34:49.6550443Z [OK] Downloaded data0.wrm (573.8 KB)
2026-01-05T01:34:49.6550860Z [OK] Copied data0.wrm to test_data (replaced existing)
2026-01-05T01:34:49.6551343Z [OK] Copied data0.wrm to databases (replaced existing)
2026-01-05T01:34:49.6551668Z 
2026-01-05T01:34:49.6551799Z ============================================================
2026-01-05T01:34:49.6552233Z Test 4: Testing runeqpt (data0 to data1 conversion)
2026-01-05T01:34:49.6552662Z ============================================================
2026-01-05T01:34:49.6553233Z [INFO] Working directory: C:\Users\RUNNER~1\AppData\Local\Temp\tmpo28dflqk
2026-01-05T01:34:49.6553831Z [OK] Copied data0.wrm to working directory
2026-01-05T01:34:49.6554208Z Running EQPT on data0.wrm...
2026-01-05T01:34:49.6554501Z [OK] EQPT completed
2026-01-05T01:34:49.6554774Z [OK] data1.wrm created (0.36 MB)
2026-01-05T01:34:49.6555204Z [OK] Copied data1.wrm to bundled databases (replaced existing)
2026-01-05T01:34:49.6555561Z 
2026-01-05T01:34:49.6557906Z ============================================================
2026-01-05T01:34:49.6558451Z Test 5: Testing simple speciation (wrm database)
2026-01-05T01:34:49.6558900Z ============================================================
2026-01-05T01:34:49.6559760Z Running speciation on C:\hostedtoolcache\windows\Python\3.10.11\x64\lib\site-packages\aqequil\test_data\input_example_wrm.csv...
2026-01-05T01:34:49.6560764Z [INFO] Working directory: C:\Users\RUNNER~1\AppData\Local\Temp\tmpwlj5nwat
2026-01-05T01:34:49.6561324Z [OK] Copied data0.wrm to working directory
2026-01-05T01:34:49.6561721Z Running EQPT to create data1.wrm...
2026-01-05T01:34:49.6562085Z [OK] EQPT completed, data1.wrm created
2026-01-05T01:34:49.6562501Z [OK] AqEquil instance created with wrm database
2026-01-05T01:34:49.6563470Z The input file column 'logfO2' will be used to set sample redox state. If a another column is desired, set it manually using the redox_flag parameter.
2026-01-05T01:34:49.6564713Z No 'charge_balance_on' column found in input file. Defaulting to no charge balancing for all samples.
2026-01-05T01:34:49.6565841Z Warning: no 'logfO2' column found. Attempting to find a column for aqueous O2 to estimate logfO2 at sample temperature and pressure...
2026-01-05T01:34:49.6566735Z Using wrm to speciate Bison Pool
2026-01-05T01:34:49.6567099Z Using wrm to speciate Spray Geyser Source
2026-01-05T01:34:49.6567895Z Warning: non-numeric aqueous O2 value in sample Crater Hills Geyser. Resorting to using Log fO2 (log bars) with a value of -6
2026-01-05T01:34:49.6568754Z Using wrm to speciate Crater Hills Geyser
2026-01-05T01:34:49.6569145Z Using wrm to speciate Ambergris
2026-01-05T01:34:49.6569497Z Using wrm to speciate MLS Source
2026-01-05T01:34:49.6570526Z Using wrm to speciate Gas Crack
2026-01-05T01:34:49.6570848Z Using wrm to speciate Snail
2026-01-05T01:34:49.6571144Z Finished!
2026-01-05T01:34:49.6571385Z [OK] Speciation completed
2026-01-05T01:34:49.6571737Z [OK] aq_distribution is a DataFrame with 81 rows
2026-01-05T01:34:49.6572030Z 
2026-01-05T01:34:49.6572172Z ============================================================
2026-01-05T01:34:49.6572576Z Test 6: Testing water-rock reaction
2026-01-05T01:34:49.6572939Z ============================================================
2026-01-05T01:34:49.6573783Z Running speciation on C:\hostedtoolcache\windows\Python\3.10.11\x64\lib\site-packages\aqequil\test_data\input_example_wrm.csv...
2026-01-05T01:34:49.6574779Z [INFO] Working directory: C:\Users\RUNNER~1\AppData\Local\Temp\tmpxujnbiqy
2026-01-05T01:34:49.6575504Z [OK] Copied wrm_data_latest.csv to bundled databases (replaced existing)
2026-01-05T01:34:49.6576176Z [OK] Copied elements.csv to bundled databases (replaced existing)
2026-01-05T01:34:49.6576910Z [OK] Copied solid_solutions.csv to bundled databases (replaced existing)
2026-01-05T01:34:49.6577606Z [OK] Copied wrm_data_logk.csv to bundled databases (replaced existing)
2026-01-05T01:34:49.6578286Z [OK] Copied wrm_data_logk_s.csv to bundled databases (replaced existing)
2026-01-05T01:34:49.6579420Z The input file column 'logfO2' will be used to set sample redox state. If a another column is desired, set it manually using the redox_flag parameter.
2026-01-05T01:34:49.6580459Z Getting wrm_data_latest.csv ready. This will take a moment...
2026-01-05T01:34:49.6581219Z No 'charge_balance_on' column found in input file. Defaulting to no charge balancing for all samples.
2026-01-05T01:34:49.6582293Z Warning: a column for Pressure was not found in the sample input file. Defaulting to water saturation pressure...
2026-01-05T01:34:49.6583542Z Warning: no 'logfO2' column found. Attempting to find a column for aqueous O2 to estimate logfO2 at sample temperature and pressure...
2026-01-05T01:34:49.6584466Z Using wrm_data_latest.csv to speciate Bison Pool
2026-01-05T01:34:49.6584967Z Using wrm_data_latest.csv to speciate Spray Geyser Source
2026-01-05T01:34:49.6585883Z Warning: non-numeric aqueous O2 value in sample Crater Hills Geyser. Resorting to using Log fO2 (log bars) with a value of -6
2026-01-05T01:34:49.6587560Z Using wrm_data_latest.csv to speciate Crater Hills Geyser
2026-01-05T01:34:49.6588092Z Using wrm_data_latest.csv to speciate Ambergris
2026-01-05T01:34:49.6588632Z Using wrm_data_latest.csv to speciate MLS Source
2026-01-05T01:34:49.6589223Z Using wrm_data_latest.csv to speciate Gas Crack
2026-01-05T01:34:49.6589651Z Using wrm_data_latest.csv to speciate Snail
2026-01-05T01:34:49.6590005Z Finished!
2026-01-05T01:34:49.6590252Z [OK] Initial speciation completed
2026-01-05T01:34:49.6590579Z [OK] Reaction prepared
2026-01-05T01:34:49.6590879Z Running water-rock reaction...
2026-01-05T01:34:49.6591256Z Using wrm_data_latest.csv to react Bison.Pool
2026-01-05T01:34:49.6591537Z 
2026-01-05T01:34:49.6591765Z The sample 'Bison Pool' experienced errors during the reaction:
2026-01-05T01:34:49.6592364Z  * Error - (EQ6/intmtb) A mass balance is defined on the input
2026-01-05T01:34:49.6592993Z        file for NH4+ (Aqueous solution), but this species isn't in the
2026-01-05T01:34:49.6593658Z        currently active basis set. Either it isn't on the current data file
2026-01-05T01:34:49.6594277Z        or it has been suppressed as by an nxmod or iopt(15) option.
2026-01-05T01:34:49.6594643Z 
2026-01-05T01:34:49.6595142Z Mass transfer results for sample 'Bison Pool' could not be saved because the calculation did not finish due to error(s).
2026-01-05T01:34:49.6595839Z 
2026-01-05T01:34:49.6596034Z Using wrm_data_latest.csv to react Spray.Geyser.Source
2026-01-05T01:34:49.6596371Z 
2026-01-05T01:34:49.6596640Z The sample 'Spray Geyser Source' experienced errors during the reaction:
2026-01-05T01:34:49.6597262Z  * Error - (EQ6/intrct) The reactant antigorite isn't among
2026-01-05T01:34:49.6597836Z        the loaded minerals.
2026-01-05T01:34:49.6598021Z 
2026-01-05T01:34:49.6598582Z Mass transfer results for sample 'Spray Geyser Source' could not be saved because the calculation did not finish due to error(s).
2026-01-05T01:34:49.6599299Z 
2026-01-05T01:34:49.6599513Z Using wrm_data_latest.csv to react Crater.Hills.Geyser
2026-01-05T01:34:49.6599964Z Using wrm_data_latest.csv to react Ambergris
2026-01-05T01:34:49.6600371Z Using wrm_data_latest.csv to react MLS.Source
2026-01-05T01:34:49.6600788Z Using wrm_data_latest.csv to react Gas.Crack
2026-01-05T01:34:49.6601051Z 
2026-01-05T01:34:49.6601275Z The sample 'Gas Crack' experienced errors during the reaction:
2026-01-05T01:34:49.6601915Z  * Error - (EQ6/path) The equilibrium calculation failed at the initial value
2026-01-05T01:34:49.6602448Z        of reaction progress.
2026-01-05T01:34:49.6602663Z 
2026-01-05T01:34:49.6603176Z Mass transfer results for sample 'Gas Crack' could not be saved because the calculation did not finish due to error(s).
2026-01-05T01:34:49.6603822Z 
2026-01-05T01:34:49.6603955Z Using wrm_data_latest.csv to react Snail
2026-01-05T01:34:49.6604225Z 
2026-01-05T01:34:49.6604427Z The sample 'Snail' experienced errors during the reaction:
2026-01-05T01:34:49.6605057Z  * Error - (EQ6/path) The equilibrium calculation failed at the initial value
2026-01-05T01:34:49.6605604Z        of reaction progress.
2026-01-05T01:34:49.6605806Z 
2026-01-05T01:34:49.6606318Z Mass transfer results for sample 'Snail' could not be saved because the calculation did not finish due to error(s).
2026-01-05T01:34:49.6606976Z 
2026-01-05T01:34:49.6607084Z [OK] Reaction completed
2026-01-05T01:34:49.6607420Z [OK] misc_params is a DataFrame with 12 rows
2026-01-05T01:34:49.6607693Z 
2026-01-05T01:34:49.6607834Z ============================================================
2026-01-05T01:34:49.6608190Z TEST SUMMARY
2026-01-05T01:34:49.6608454Z ============================================================
2026-01-05T01:34:49.6608850Z [PASS] Bundled Executables
2026-01-05T01:34:49.6609159Z [PASS] Import and Basic Usage
2026-01-05T01:34:49.6609482Z [PASS] Download Latest data0.wrm
2026-01-05T01:34:49.6609824Z [PASS] EQPT Data0 to Data1 Conversion
2026-01-05T01:34:49.6610181Z [PASS] Simple Speciation (wrm database)
2026-01-05T01:34:49.6610668Z [PASS] Water-Rock Reaction
2026-01-05T01:34:49.6610998Z ============================================================
2026-01-05T01:34:49.6611267Z 
2026-01-05T01:34:49.6611379Z [PASS] All tests passed!
2026-01-05T01:34:49.8692724Z Post job cleanup.
2026-01-05T01:34:50.0861859Z Post job cleanup.
2026-01-05T01:34:50.2957712Z [command]"C:\Program Files\Git\bin\git.exe" version
2026-01-05T01:34:50.3191301Z git version 2.50.0.windows.1
2026-01-05T01:34:50.3274852Z Temporarily overriding HOME='D:\a\_temp\3f6471db-e137-4121-8cee-44fb74c7df9f' before making global git config changes
2026-01-05T01:34:50.3276069Z Adding repository directory to the temporary git global config as a safe directory
2026-01-05T01:34:50.3290244Z [command]"C:\Program Files\Git\bin\git.exe" config --global --add safe.directory D:\a\aqequil\aqequil
2026-01-05T01:34:50.3583652Z [command]"C:\Program Files\Git\bin\git.exe" config --local --name-only --get-regexp core\.sshCommand
2026-01-05T01:34:50.3855302Z [command]"C:\Program Files\Git\bin\git.exe" submodule foreach --recursive "sh -c \"git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || :\""
2026-01-05T01:34:50.8002351Z [command]"C:\Program Files\Git\bin\git.exe" config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader
2026-01-05T01:34:50.8238813Z http.https://github.com/.extraheader
2026-01-05T01:34:50.8303672Z [command]"C:\Program Files\Git\bin\git.exe" config --local --unset-all http.https://github.com/.extraheader
2026-01-05T01:34:50.8555902Z [command]"C:\Program Files\Git\bin\git.exe" submodule foreach --recursive "sh -c \"git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || :\""
2026-01-05T01:34:51.2849259Z [command]"C:\Program Files\Git\bin\git.exe" config --local --name-only --get-regexp ^includeIf\.gitdir:
2026-01-05T01:34:51.3104534Z [command]"C:\Program Files\Git\bin\git.exe" submodule foreach --recursive "git config --local --show-origin --name-only --get-regexp remote.origin.url"
2026-01-05T01:34:51.7376000Z Cleaning up orphan processes
